Molecular Cytogenetics (FISH, GISH)
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Question No. 1 Marks +1 -0 Time
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Which of the following techniques is primarily used to detect specific DNA sequences on chromosomes by hybridizing fluorescently labeled probes to denatured chromosomal DNA?
Question No. 2 Marks +1 -0 Time
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In the context of FISH, what is the primary purpose of 'chromosome painting' probes?
Question No. 3 Marks +1 -0 Time
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Consider the following statements regarding GISH (Genomic In Situ Hybridization):

1. GISH uses total genomic DNA from two parental species as probes.
2. GISH is commonly used to differentiate between parental genomes in interspecific hybrids.
3. Blocking DNA is often used in GISH to suppress hybridization of repetitive sequences common to both genomes.

How many of the above statements are correct?
Question No. 4 Marks +1 -0 Time
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Which type of FISH probe is most suitable for detecting microdeletion syndromes like Prader-Willi or Angelman syndrome?
Question No. 5 Marks +1 -0 Time
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What is the primary role of formamide in the FISH hybridization buffer?
Question No. 6 Marks +1 -0 Time
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Match the following FISH probe types with their common applications:

Probe TypeApplication
1. Centromeric ProbeP. Detection of chromosomal translocations
2. Telomeric ProbeQ. Aneuploidy screening (e.g., Trisomy 21)
3. Whole Chromosome PaintR. Identification of cryptic subtelomeric rearrangements
Question No. 7 Marks +1 -0 Time
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A key difference between FISH and standard cytogenetics (e.g., G-banding) is that FISH:
Question No. 8 Marks +1 -0 Time
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Which of the following is NOT a common fluorochrome used in FISH applications?
Question No. 9 Marks +1 -0 Time
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In a typical FISH experiment, what is the purpose of denaturing both the probe and the target chromosomal DNA?
Question No. 10 Marks +1 -0 Time
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A researcher is studying an allopolyploid plant species and wants to identify which chromosomes originated from each of its two parental species. Which molecular cytogenetic technique would be most appropriate?
Question No. 11 Marks +1 -0 Time
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Which of the following scenarios would most likely require the use of an interphase FISH analysis rather than metaphase FISH?
Question No. 12 Marks +1 -0 Time
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What is the function of DAPI (4',6-diamidino-2-phenylindole) in a typical FISH experiment?
Question No. 13 Marks +1 -0 Time
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A patient is suspected of having a Philadelphia chromosome (t(9;22)). Which FISH probe strategy would be most effective for confirming this translocation?
Question No. 14 Marks +1 -0 Time
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Which of the following factors does NOT directly influence the stringency of FISH hybridization?
Question No. 15 Marks +1 -0 Time
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In the context of GISH, what is the primary role of 'blocking DNA' (e.g., unlabeled genomic DNA from one parent)?
Question No. 16 Marks +1 -0 Time
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Which of the following statements best describes the principle of Multicolor FISH (M-FISH)?
Question No. 17 Marks +1 -0 Time
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A limitation of FISH is its inability to detect:
Question No. 18 Marks +1 -0 Time
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What kind of microscope is essential for visualizing the results of a FISH experiment?
Question No. 19 Marks +1 -0 Time
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Consider the following applications of molecular cytogenetics:

1. Diagnosis of specific genetic syndromes caused by chromosomal deletions.
2. Identification of species-specific chromosomes in interspecific hybrids.
3. Detection of gene amplification in cancer cells.
4. High-resolution mapping of novel genes to specific chromosome bands.

Which of these applications are directly achievable using FISH or GISH techniques?
Question No. 20 Marks +1 -0 Time
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Which step in a FISH protocol immediately follows the denaturation of chromosomal DNA and probes?
Question No. 21 Marks +1 -0 Time
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What is the primary advantage of using a 'directly labeled' FISH probe compared to an 'indirectly labeled' probe?
Question No. 22 Marks +1 -0 Time
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In the context of plant cytogenetics, GISH is particularly useful for:
Question No. 23 Marks +1 -0 Time
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Which statement accurately describes the main difference in probe preparation for FISH versus GISH?
Question No. 24 Marks +1 -0 Time
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A patient with suspected chronic myeloid leukemia (CML) shows a normal karyotype by conventional G-banding. Which FISH technique would be most appropriate to confirm or rule out the Philadelphia chromosome (t(9;22)) at a submicroscopic level?
Question No. 25 Marks +1 -0 Time
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The process of 'post-hybridization washing' in FISH is critical for:

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